By special request of sexybass and daisy_knotwise, I went down to the studio today and powered up the mixer and computer and made sure that they were talking to each other before I left. Apparently, my mixer mojo was working correctly, as everything seems ok.
Still turned off (to prevent damage in case the mixer loses its little mind) are:
The near-field monitor speakers
The headphone amp
The phantom power to the mics on the Gold Channel
And I'm pretty sure I turned on the Z-Sys digital patch bay, but they might want to check and make sure that the lights are on there. :)